PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0195031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 187aa MW: 20420.9 Da PI: 9.0947 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.2 | 1.1e-09 | 12 | 39 | 29 | 56 |
AP2 29 krfslgkfgtaeeAakaaiaarkklege 56 r++lg+++tae Aa a+++a+ kl+ge RcHm_v2.0_Chr7g0195031 12 MRVWLGTYDTAEAAAYAYDRAAYKLRGE 39 69************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MGRRDQTPQN RMRVWLGTYD TAEAAAYAYD RAAYKLRGEY ARLNFPNLKD PTKLGFADGS 60 RLNAVKASVD AKIQAICQKV KREKAKKNNA KKSSSGSVKT EKVTKVDSPS SSSSHLTFYD 120 GLGQELLSSP TPTGSEGRCE NSSTPSVSND GPISVAMAEM EDLEFEGCSL ARMPSFDPEL 180 IWKVLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 5e-21 | ERF family protein |