PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0179801 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 393aa MW: 43844.1 Da PI: 9.3336 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 72.8 | 3.8e-23 | 30 | 95 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+ ++ + v l+++a +L v +rRRiYDi+NVLe+++++++k+kn+++wkg RcHm_v2.0_Chr7g0179801 30 RKQKSLGLLCSNFIALYDREGVTSVGLDDAAARL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYTWKG 95 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 76.9 | 1.9e-24 | 168 | 248 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ + ++l+e+a+ L+ + +++k+RRiYDi+NVL+++nliek ++k++++w g RcHm_v2.0_Chr7g0179801 168 RREKSLALLTQNFVKLFVCSTVESISLDEAARLLLGDahnasVMRTKVRRIYDIANVLSSMNLIEKthtadTRKPAYKWLG 248 689**************************************999***************************9*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence |
MESAAPPPPP PPPPPPPQPE TASRHHAYSR KQKSLGLLCS NFIALYDREG VTSVGLDDAA 60 ARLGVERRRI YDIVNVLESV GVLSRKAKNQ YTWKGFGAIP IALHQLKEEG LKENFNTFHG 120 DLQGSDDPKC SQGSDDEEGD ESGPATGSQN ENPGVHPKSS GNSKNDNRRE KSLALLTQNF 180 VKLFVCSTVE SISLDEAARL LLGDAHNASV MRTKVRRIYD IANVLSSMNL IEKTHTADTR 240 KPAYKWLGLK GKDVVSSASD ESRKRAFGTD ITNVSCKRGK VESSTAGKLE AQKQKLHETT 300 VRQRERREST VHKVDRNNLE DSKENTKSYQ FGPFAPVTIA RAGNFNMKKV DWDNLSSTYR 360 PQYQNQALKE LFSHYMEAWK SWYSEVVEKP IQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-140 | E2F/DP family protein |