PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr6g0308491
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 322aa    MW: 34939.6 Da    PI: 9.9832
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr6g0308491genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.7e-32249307259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                              D+y+WrKYGqK++kgs++pr+YY+C+s+ gCp++k+ver+ +dp+++++tYeg+Hnh+
  RcHm_v2.0_Chr6g0308491 249 ADEYSWRKYGQKPIKGSPHPRGYYKCSSQrGCPARKHVERAVDDPSMLIVTYEGDHNHS 307
                             69*************************999****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAVDLMMGLV DSFAAKMEEN DVKEAASAGI QSVEKFISLM SSSSSTPESA AMEYKAVADM  60
AVNKFRKVIS LLDRGRTGHA RFRRGPVTTT SPQSPLVLTK ETEQSSFQFQ EALNTKTEQS  120
QSSSAFKVYC PKPVLRLPPL PKTSTSFHFS ATPAVSGSNS FMSGDGETTT LQHSVSSGFQ  180
LTNMSVSSAG KPPLPSSSLK RKCHSVDDAA ALRCGSSSSR CHCSKKRKSR VKRVTRIPAI  240
STKMADIPAD EYSWRKYGQK PIKGSPHPRG YYKCSSQRGC PARKHVERAV DDPSMLIVTY  300
EGDHNHSQAV TEAMAAIVLE SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-84WRKY family protein