PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr6g0300561
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family BES1
Protein Properties Length: 398aa    MW: 44133.5 Da    PI: 9.509
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr6g0300561genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822203.27.5e-63942282139
                  DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasa 88 
                             + +rkp+w+ErEnn+rRERrRRaiaaki+aGLRaqG ++lpk++DnneVlkALc eAGw+ve+DGttyrkg+kp+  +++ g+s+++
  RcHm_v2.0_Chr6g0300561  94 TVRRKPSWRERENNRRRERRRRAIAAKIFAGLRAQGSFNLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGFKPP-PTDTPGTSTKV 179
                             568************************************************************************.9********** PP

                  DUF822  89 spesslqsslkssalaspvesysaspksssfpspssldsislasaasllpv 139
                             +p ssl+ s+ ss+++sp++sy+asp+sssfpsps+   ++++  ++l+p 
  RcHm_v2.0_Chr6g0300561 180 TPYSSLNPSPLSSSFPSPIPSYQASPSSSSFPSPSRCFDATNS--SNLFPN 228
                             ***********************************96555444..444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MHRNFSKNEP FFFFFFFLTL GEILLHFNRK SESAFLVNTR ISISDSTELK STATQSLFTS  60
SLITTERERE RGGGRVDCCC SWRMTSDGAT SASTVRRKPS WRERENNRRR ERRRRAIAAK  120
IFAGLRAQGS FNLPKHCDNN EVLKALCVEA GWTVEEDGTT YRKGFKPPPT DTPGTSTKVT  180
PYSSLNPSPL SSSFPSPIPS YQASPSSSSF PSPSRCFDAT NSSNLFPNLR SAIPSSLPPL  240
RISNSAPVTP PLSSPNSRKC QPIPNWDSIA KQSMASFNYP FYAVSAPASP TRHQHQLHTP  300
PTIFECDESD TSTVESGQWM NFQKFATALS ARPTSPTFNL VKPVTAQQNL PANGMAEMGR  360
GSEFEFLGEQ VKPWVGERIH EVGLDDLELT LGNGKARS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196115RRKPSWRERENNRRRERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-115BES1 family protein