PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr6g0275281
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 315aa    MW: 34513.8 Da    PI: 8.4521
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr6g0275281genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.41.3e-12233290360
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                             + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L +e  e ++e  k  
  RcHm_v2.0_Chr6g0275281 233 AQQRQRRMIKNRESAARSRERKQAYQIELESMAVRLEEENERLLQEKAERTEERLKQL 290
                             679***************************************9876555555544443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MASSKLISSS SNSRNSDLSR RPSSNSTKPK PPSSSSSAAA AANQTLNTTT AGGGYIHPTP  60
VQLGSMTVDG LFYNNSLTTS ELEAQINLID TAGLEINSAA SVSSPPPRPR TVDEVWQEIV  120
SGVSRKECKE EVPDELMTLE DFLARAGAVE DNDIKDLHLV PPPETERLSG GLSGGMFGFD  180
QIALSPFQSI EKIEKVEGSI VGFGNGAEVA ASGGGRGRGK RARAVLEPMD KAAQQRQRRM  240
IKNRESAARS RERKQAYQIE LESMAVRLEE ENERLLQEKA ERTEERLKQL MENIIPVVEK  300
RRPSRVLRRV RSLQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-40bZIP family protein