PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0248661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | CAMTA | ||||||||
Protein Properties | Length: 79aa MW: 9443.89 Da PI: 9.691 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 31.3 | 3.5e-10 | 32 | 73 | 72 | 112 |
CG-1 72 kLKvggvevlyc.yYahseenptfqrrcywlLeeelekivlv 112 +vg+v+vl c yY h+ en++fqrr+y +Lee+++k + RcHm_v2.0_Chr6g0248661 32 SFQVGNVNVLRCsYYDHGGENRNFQRRIYSMLEEDYKKSNFQ 73 567999****996889*******************9987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence |
MIALPFFAYI KSYFVRDSFV LKLKLLTKNC TSFQVGNVNV LRCSYYDHGG ENRNFQRRIY 60 SMLEEDYKKS NFQPQLETK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 8e-10 | CAMTA family protein |