PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr5g0073151

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 475aa MW: 51082.9 Da PI: 6.6472

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr5g0073151	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	5.8e-10	274	322	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l + RcHm_v2.0_Chr5g0073151 274 KRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQ 322 9****************************************99887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSTLPQQEPQ PPNPNPTPTP MQQHPLPNSN PNPNPNPNPN SLLLPRTIAN ANTRDAANAA 60 SASSSPDANV NVNAISSSEN RAAPFTTSAA TSSSSSSSSS STTTMLGSTT SPVPNNNNNN 120 HNHPFIRSTA AATGGTHHHH SSGSGTSINH RRAHSEVSFR LPEDLMDLSG PDPFNGAGSS 180 TDDLGSEEDL FSTYIDLDKL QAGAADDNGP DDIKGPNGPN ENNGGVGEKR PSRHRHSSSV 240 DASSTSTGVF GEVMEAKKAM PPDKLAELWN LDPKRAKRIL ANRQSAARSK ERKARYIQEL 300 ERKVQTLQTE ATTLSAQLTL FQRDTTGLST ENTELKLRLQ AMEQQAQLRD SLNEALKKEV 360 ERLKVATGEM MSHSESFNLG MHQMPYNNNL SAYFPITQQQ PGPAGHQNMQ LPPFNHSQSS 420 MPSNHLHQPN SHTLSDIMQN GPVGQLQGLD ISNKMPHLVK SEGPSLSASE SSTTF

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSTLPQQEPQ PPNPNPTPTP MQQHPLPNSN PNPNPNPNPN SLLLPRTIAN ANTRDAANAA  60
SASSSPDANV NVNAISSSEN RAAPFTTSAA TSSSSSSSSS STTTMLGSTT SPVPNNNNNN  120
HNHPFIRSTA AATGGTHHHH SSGSGTSINH RRAHSEVSFR LPEDLMDLSG PDPFNGAGSS  180
TDDLGSEEDL FSTYIDLDKL QAGAADDNGP DDIKGPNGPN ENNGGVGEKR PSRHRHSSSV  240
DASSTSTGVF GEVMEAKKAM PPDKLAELWN LDPKRAKRIL ANRQSAARSK ERKARYIQEL  300
ERKVQTLQTE ATTLSAQLTL FQRDTTGLST ENTELKLRLQ AMEQQAQLRD SLNEALKKEV  360
ERLKVATGEM MSHSESFNLG MHQMPYNNNL SAYFPITQQQ PGPAGHQNMQ LPPFNHSQSS  420
MPSNHLHQPN SHTLSDIMQN GPVGQLQGLD ISNKMPHLVK SEGPSLSASE SSTTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	3e-83	bZIP family protein