PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RcHm_v2.0_Chr5g0031561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | NZZ/SPL | ||||||||
Protein Properties | Length: 441aa MW: 48099.7 Da PI: 8.471 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 20.7 | 6.9e-07 | 13 | 60 | 39 | 87 |
NOZZLE 39 tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvg 87 + gr sk ++ kqkk rg+gva+le+ ++ee++kk + RcHm_v2.0_Chr5g0031561 13 PTGGFGRSSNSKKSN-KQKKVPQRGLGVAQLEKIRLEEQQKKAASVLTS 60 555678999999876.6677778****************9998654444 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 441 aa Download sequence |
MGKEEITQKC TSPTGGFGRS SNSKKSNKQK KVPQRGLGVA QLEKIRLEEQ QKKAASVLTS 60 PTPPASNSLP SPTKSSPCVP NSAPIRHYQP PSSIPFQSLP SLDLPSPNSI FRPPNADVVR 120 KPNSISTVPL PNKETHGFEI PGHGNVVVPN LWNPNCEYNS ADLNKESSSR ILDPGFAFRP 180 SLNNLPTFDN SNAIWALPNF PQRRHQFHHQ PPPPPPSLVN VSSATSLSSS SSVLNFHTEP 240 PSNQSYHSIY TTPMWSEEER MVGMKRLYPF SHDNDAPSIN FKFPTFAPPP MRTDETTSCG 300 NRGGTSNLDP DDNTIFREGS TCSTKISESN SKISIKENGN VNGDFLTLAP PTTNRTCPSP 360 KFNFPPAYLA FHNPEVPDFA SFPYKGSSED TFLQSGPSGS TPQQAFYTFI PPAKSQIVKP 420 AATINNCNGE VGETVDLNLK L |