PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr5g0031561
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NZZ/SPL
Protein Properties Length: 441aa    MW: 48099.7 Da    PI: 8.471
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr5g0031561genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE20.76.9e-0713603987
                  NOZZLE 39 tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvg 87
                            +    gr   sk ++ kqkk   rg+gva+le+ ++ee++kk +     
  RcHm_v2.0_Chr5g0031561 13 PTGGFGRSSNSKKSN-KQKKVPQRGLGVAQLEKIRLEEQQKKAASVLTS 60
                            555678999999876.6677778****************9998654444 PP

Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MGKEEITQKC TSPTGGFGRS SNSKKSNKQK KVPQRGLGVA QLEKIRLEEQ QKKAASVLTS  60
PTPPASNSLP SPTKSSPCVP NSAPIRHYQP PSSIPFQSLP SLDLPSPNSI FRPPNADVVR  120
KPNSISTVPL PNKETHGFEI PGHGNVVVPN LWNPNCEYNS ADLNKESSSR ILDPGFAFRP  180
SLNNLPTFDN SNAIWALPNF PQRRHQFHHQ PPPPPPSLVN VSSATSLSSS SSVLNFHTEP  240
PSNQSYHSIY TTPMWSEEER MVGMKRLYPF SHDNDAPSIN FKFPTFAPPP MRTDETTSCG  300
NRGGTSNLDP DDNTIFREGS TCSTKISESN SKISIKENGN VNGDFLTLAP PTTNRTCPSP  360
KFNFPPAYLA FHNPEVPDFA SFPYKGSSED TFLQSGPSGS TPQQAFYTFI PPAKSQIVKP  420
AATINNCNGE VGETVDLNLK L