PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr3g0487201 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 320aa MW: 35696 Da PI: 7.499 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.6 | 1.1e-32 | 166 | 222 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dgy+WrKYGqK vk+s+fprsY+rCtsa+C+vkk+ver+ +dp +v++tYeg+H+h RcHm_v2.0_Chr3g0487201 166 EDGYRWRKYGQKAVKNSPFPRSYFRCTSASCNVKKRVERCVSDPGIVVTTYEGQHTH 222 8******************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence |
MEKKDHLIKM EGNTRSSSFS ETTADYSYPF PGMFDFSQGD QKDSLGFMEL LGTQDFCPAN 60 SLFDLPQITT PQVLPTTSID MAKEYSFNPS TPNSSSISSA SSEAVNEEPH TDNKAAADQQ 120 EEDNGHDQPK PKKGLKANQK RKKTTEKKLR EPRFAFMTKS EVDHLEDGYR WRKYGQKAVK 180 NSPFPRSYFR CTSASCNVKK RVERCVSDPG IVVTTYEGQH THLSPLLSPL MLPPPPPPPP 240 TTAPNSIIMP RTLFSQYQQQ QGLRPFADNQ GCNLGFSTPN GTNWSFLNER WFCSPAGGSA 300 LMTDHGLLQD IVPSNMLKQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 4e-40 | WRKY family protein |