PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr3g0487201
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 320aa    MW: 35696 Da    PI: 7.499
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr3g0487201genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.61.1e-32166222258
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                             +Dgy+WrKYGqK vk+s+fprsY+rCtsa+C+vkk+ver+ +dp +v++tYeg+H+h
  RcHm_v2.0_Chr3g0487201 166 EDGYRWRKYGQKAVKNSPFPRSYFRCTSASCNVKKRVERCVSDPGIVVTTYEGQHTH 222
                             8******************************************************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEKKDHLIKM EGNTRSSSFS ETTADYSYPF PGMFDFSQGD QKDSLGFMEL LGTQDFCPAN  60
SLFDLPQITT PQVLPTTSID MAKEYSFNPS TPNSSSISSA SSEAVNEEPH TDNKAAADQQ  120
EEDNGHDQPK PKKGLKANQK RKKTTEKKLR EPRFAFMTKS EVDHLEDGYR WRKYGQKAVK  180
NSPFPRSYFR CTSASCNVKK RVERCVSDPG IVVTTYEGQH THLSPLLSPL MLPPPPPPPP  240
TTAPNSIIMP RTLFSQYQQQ QGLRPFADNQ GCNLGFSTPN GTNWSFLNER WFCSPAGGSA  300
LMTDHGLLQD IVPSNMLKQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.14e-40WRKY family protein