PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0473071

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 442aa MW: 48621.4 Da PI: 7.9266

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0473071	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.5	3.4e-14	357	405	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsR+RK+a++ eLe + +L +eN Lk+ l el+ RcHm_v2.0_Chr3g0473071 357 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENANLKQALAELE 405 79****************************************9999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MTNTTMGGVS ESEMMSHGKE ELPGQSDQYA KNNQLFTSLG RQSSIYSLTL DEFQHTLSEN 60 GKNFGSMNMD EFLNSIWTAE ENQAINSTHH NNSNNLNPNH INNISNNNVQ HPALSEITME 120 KEGVIAKQPS LPRQGSLTLP APLCRKTVDE VWSEMHKEQK AQAQQQNSNH NNSNDGAQNS 180 EYVPRQPTFG EMTLEDFLVK AGVVREPDSM SVVPLPPQPQ QQPQQYGIVG QSFVMGMGAN 240 AGASTSTTPV LPNYQTIPQG GAPVGESSGY VTNGKRNGAY PPPPPQAVCF GGRVVNGGGG 300 YAPTQPIGMA TSVSPVSSDG MCASQIENSG GQYAMDMGAL RGRKRIIDGP VEKVVERRQR 360 RMIKNRESAA RSRARKQAYT VELEAELNQL REENANLKQA LAELEMKRKQ QYCEEMRKRV 420 QSRAQKAVEK LWMLKRSHSC AV

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MTNTTMGGVS ESEMMSHGKE ELPGQSDQYA KNNQLFTSLG RQSSIYSLTL DEFQHTLSEN  60
GKNFGSMNMD EFLNSIWTAE ENQAINSTHH NNSNNLNPNH INNISNNNVQ HPALSEITME  120
KEGVIAKQPS LPRQGSLTLP APLCRKTVDE VWSEMHKEQK AQAQQQNSNH NNSNDGAQNS  180
EYVPRQPTFG EMTLEDFLVK AGVVREPDSM SVVPLPPQPQ QQPQQYGIVG QSFVMGMGAN  240
AGASTSTTPV LPNYQTIPQG GAPVGESSGY VTNGKRNGAY PPPPPQAVCF GGRVVNGGGG  300
YAPTQPIGMA TSVSPVSSDG MCASQIENSG GQYAMDMGAL RGRKRIIDGP VEKVVERRQR  360
RMIKNRESAA RSRARKQAYT VELEAELNQL REENANLKQA LAELEMKRKQ QYCEEMRKRV  420
QSRAQKAVEK LWMLKRSHSC AV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	299	GGRVVNGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	1e-113	bZIP family protein