PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr3g0469111 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | S1Fa-like | ||||||||
Protein Properties | Length: 80aa MW: 8674.32 Da PI: 10.608 | ||||||||
Description | S1Fa-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | S1FA | 125.9 | 1.2e-39 | 16 | 80 | 6 | 70 |
S1FA 6 veakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 + +kG+nPGlivllvv gll++flvgny+lyvyaq+++PP+kkkPvskkklk+e+lkqGv++PGe RcHm_v2.0_Chr3g0469111 16 AGTKGFNPGLIVLLVVVGLLVTFLVGNYALYVYAQRTIPPKKKKPVSKKKLKKERLKQGVSAPGE 80 567*************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 80 aa Download sequence |
MADDFSDKVP PSFDAAGTKG FNPGLIVLLV VVGLLVTFLV GNYALYVYAQ RTIPPKKKKP 60 VSKKKLKKER LKQGVSAPGE |