PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0151681
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 370aa    MW: 41584.9 Da    PI: 7.3303
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0151681genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.41.5e-33201258259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  RcHm_v2.0_Chr2g0151681 201 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCLVKKRVERSFQDPTIVITTYEGQHNHQ 258
                             8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MSKEKKSPYL QYDPFDYNPH EIDRSSFPFF NYGSNSSIYN IPQTPADPQT QNLHGFESDP  60
SYLMSFADCL NGSVDYTTLS KAFDISCSSS EVISPPLLDQ DDNSNTKAVA AGVGDQNPST  120
PNSSLSCSSN EAGAANHEHG NDQDSDKISK KDKHPKVVQS EEAPGDHEDK SKKVNKAKKK  180
EKRQREPRFA FLTKSEIDHL EDGYRWRKYG QKAVKNSPYP RSYYRCTTQK CLVKKRVERS  240
FQDPTIVITT YEGQHNHQCP ATLRGSINAV GMLSPSFLAS AASGGFGTSN NESPRFPHEL  300
LLTQLLTPVN NNQLQLQAHH HHHDPASSML YSNLMNTLHQ NQQQQQQLHV PHDYNMLQNL  360
ASSFSHKEKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180185KEKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-51WRKY family protein