PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0149271 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 138aa MW: 16148.6 Da PI: 9.4192 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.9 | 7.5e-13 | 7 | 117 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-.......................TTHHHHHHH CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgr.yvlt.......................kGWkeFvka 71 +l+++ l l +fa++++++ s+ + l+ ++g +W v +++ + + + t +GW +F+ + RcHm_v2.0_Chr2g0149271 7 YLTTA-LKLDINFAQKYNLS---SRNVNLQIPNGSTWPVICSVtN-IEEDgIRYTregvaryrypswcireevariryRGWIKFATD 88 44444.899999*****887...457***************9952.3333333334588889999********************** PP HT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 72 ngLkegDfvvFkldgr.sefelvvkvfrk 99 ngL++gD++vF+++++ e +++v+++++ RcHm_v2.0_Chr2g0149271 89 NGLQVGDTCVFEMIKQqPEITFLVHIIQA 117 ************99887999999999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MMQEPSYLTT ALKLDINFAQ KYNLSSRNVN LQIPNGSTWP VICSVTNIEE DGIRYTREGV 60 ARYRYPSWCI REEVARIRYR GWIKFATDNG LQVGDTCVFE MIKQQPEITF LVHIIQATYA 120 TKLHFNNISQ NMKLRRIP |