PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0147411 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 142aa MW: 15979.3 Da PI: 6.7863 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.6 | 3.5e-11 | 29 | 115 | 4 | 93 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-.SS. CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld.gr. 87 +lt+s+v +l +p k ++ ++ t+ + +sWe+++ ++ +++ + +k W Fv++n+Lk+gD +vF+l+ + RcHm_v2.0_Chr2g0147411 29 ILTKSHVKPIYQLGIPAKLE-PV-LP--SGSIHTVLTFGAKSWEMTY--NGEKRHkQFDRKSWGAFVDENNLKAGDGLVFELKeCNs 109 56666666666666666542.22.22..222456677788*******..555555467899********************974333 PP SEE..E CS B3 88 sefelv 93 ++ ++ RcHm_v2.0_Chr2g0147411 110 TQIGFR 115 444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MAKSSSNPVV ELNGQEFWPL SGKPYFDVIL TKSHVKPIYQ LGIPAKLEPV LPSGSIHTVL 60 TFGAKSWEMT YNGEKRHKQF DRKSWGAFVD ENNLKAGDGL VFELKECNST QIGFRVQILR 120 GDIPDELLEK ANCEAEKPIF IQ |