PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0125681

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 451aa MW: 50139.3 Da PI: 8.9246

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0125681	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.4e-10	166	206	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L RcHm_v2.0_Chr2g0125681 166 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 206 788*************************9777777666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MGSRTVKIGS NDANKLVTDM PSFVTPVPTS NPIGTEGSSI RSSRISDLES LQQTLGFNIE 60 DAVDIGRSPV YNQNNSISRA PGGKDVQFST LNKLLPQKEL QPNLVSVSRS NHENWGESNM 120 ADGSPRTDTS TDDTEDKNQM IERNQMTGLL ASDSSDRSKE KPGDQKTLRR LAQNREAARK 180 SRLRKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSSG DQAHSMSGNG ALAFDVEYAR 240 WLEEHNRQIN ELRAAVNSHA GDTELRTVID NVIAHYDDIF RLKGIAAKAD VFHILSGMWK 300 TPAERCFMWI GGFRSSELLK LLVRQLEPLT EQQVMNIFNL QQSSQQAEDA LSQGMEALQQ 360 SLAETLASGS PGPSGTSGNV ANYMGQMAMA MGKLGTLEGF LRQADNLRQQ TLQQMHRILT 420 TRQSARALLA INDYFSRLRA LSSLWLARPR E

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MGSRTVKIGS NDANKLVTDM PSFVTPVPTS NPIGTEGSSI RSSRISDLES LQQTLGFNIE  60
DAVDIGRSPV YNQNNSISRA PGGKDVQFST LNKLLPQKEL QPNLVSVSRS NHENWGESNM  120
ADGSPRTDTS TDDTEDKNQM IERNQMTGLL ASDSSDRSKE KPGDQKTLRR LAQNREAARK  180
SRLRKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSSG DQAHSMSGNG ALAFDVEYAR  240
WLEEHNRQIN ELRAAVNSHA GDTELRTVID NVIAHYDDIF RLKGIAAKAD VFHILSGMWK  300
TPAERCFMWI GGFRSSELLK LLVRQLEPLT EQQVMNIFNL QQSSQQAEDA LSQGMEALQQ  360
SLAETLASGS PGPSGTSGNV ANYMGQMAMA MGKLGTLEGF LRQADNLRQQ TLQQMHRILT  420
TRQSARALLA INDYFSRLRA LSSLWLARPR E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-156	bZIP family protein