PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0115911
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 362aa    MW: 40994.7 Da    PI: 7.6996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0115911genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.8e-1275113240
                             XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                             + +k++rr+++NReAAr+sR+RKka++++Le+   +L +
  RcHm_v2.0_Chr2g0115911  75 PTDKVQRRLAQNREAARKSRLRKKAYVQQLETSRLKLVQ 113
                             579****************************86555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MNSSSTQFVT SRRMSAYEPI HQMSMWGESF MSNGNLNASA SMIMDADTQL DNQSEDASQG  60
ILGPSSKYDQ EATKPTDKVQ RRLAQNREAA RKSRLRKKAY VQQLETSRLK LVQLEQELDR  120
ARQQGLYIGS GLDANPLGYS GTMNPGVAAF EMEYGNWVEE QNKQIFELRT ALQAQISDIE  180
LHLLVDRGMS HYFKLFSMKS KAAKVDVFYV MSGMWKTSAE RFFSWIGGFR PSELLKVLLP  240
QLYPLAEQQH LDVSSLRQSC QQAEDALSQG MDKLQLTLAQ TVAADPLGED IYVPQMAIAM  300
EKLEALVSFV NQADHLRKET LQQMSRILTI RQAARGLLAL GEYFQRLRAL SSLWTTRPRE  360
LT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.20.0bZIP family protein