PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0115111 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | EIL | ||||||||
Protein Properties | Length: 156aa MW: 17902.6 Da PI: 8.9197 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 181.7 | 7.2e-56 | 1 | 131 | 152 | 281 |
SSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT- CS EIN3 152 mqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkm 238 mqhc+ppqrrfplekg++pPWWP+G+e wwge+g+s+++g+ppy+kphdlkkaw vs L+avikhm p+++++r+l+ qsk+lqdkm RcHm_v2.0_Chr2g0115111 1 MQHCKPPQRRFPLEKGLAPPWWPNGNEIWWGEQGVSQEHGPPPYRKPHDLKKAWIVSSLAAVIKHMVPNLDRVRRLVKQSKCLQDKM 87 8************************************************************************************** PP -SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXXXX CS EIN3 239 sakesfallsvlnqeekecatvsahss.slrkqspkvtlsceqk 281 +ake++++++v+nqee++++ + +++ s+ + + + l++++k RcHm_v2.0_Chr2g0115111 88 TAKETAIWSKVVNQEEAILQLITDQKPiSCPEIAGTTALHSNEK 131 ****************9775555444444444344444444443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MQHCKPPQRR FPLEKGLAPP WWPNGNEIWW GEQGVSQEHG PPPYRKPHDL KKAWIVSSLA 60 AVIKHMVPNL DRVRRLVKQS KCLQDKMTAK ETAIWSKVVN QEEAILQLIT DQKPISCPEI 120 AGTTALHSNE KRKCMFDDDC SELDRCSTCS SKNFKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 3e-60 | EIL family protein |