PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0106361
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 314aa    MW: 34188.8 Da    PI: 10.0053
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0106361genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.5e-31243300359
                             -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYe eHnh+
  RcHm_v2.0_Chr2g0106361 243 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEAEHNHS 300
                             99************************988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAVDFMGYRN FSAKLEENAV VQEAASGLES VEKLIRLLSS QQKQEKYHSM DMDCTAVADV  60
AVSKFKKVIS LLGRTRTGHA RFRRAPLPFT APPQESVNPI DSSSTRVYHA TPIQQIPAPV  120
VMHHHGSGME GTKDSSTTIN FSSYSSAATT SFMSSLTGDS DSKQPMSSSA FQITNMSQVS  180
SAGKPPLSSA SLKRKCSSDT LGSGKCGASS SGRCHCSKKR KLRLKRVVRV PAISLKMADI  240
PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RALDDPSMLV VTYEAEHNHS  300
LNIAEASNLI LESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-77WRKY family protein