PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0103571 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 190aa MW: 20777.6 Da PI: 4.1602 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.6 | 1.7e-11 | 27 | 113 | 8 | 99 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 + +l+ g l +p++ ++++g + + ++ ++g W ++l +k+ ++++l+kGW +F+k L+ g ++F+ +g+ f RcHm_v2.0_Chr2g0103571 27 AQALEDGKLEIPRTVVRQCGDR--LAQIILIQVSEGAGWGIEL--TKSNRKIWLQKGWPGFAKHYSLEHGSLLLFSSQGDyLHF--G 107 66788999***********866..555777788**********..*******************************66654444..7 PP EEEE-S CS B3 94 vkvfrk 99 v++f++ RcHm_v2.0_Chr2g0103571 108 VQIFKR 113 777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MASHGRRNRK GSVFPVTIPS FFVIVLAQAL EDGKLEIPRT VVRQCGDRLA QIILIQVSEG 60 AGWGIELTKS NRKIWLQKGW PGFAKHYSLE HGSLLLFSSQ GDYLHFGVQI FKRNTLEINY 120 PPLEMNYPPN SSSTVEMNPA SGSSHDDSAD AYADNDDNDA DDEDDDNDDA DDGGANDGDA 180 GSNEDVTTSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-15 | B3 family protein |