PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0103501 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 212aa MW: 24737.1 Da PI: 5.8377 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.4 | 2.7e-18 | 28 | 112 | 8 | 98 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 d+++ l +pkkf++e+g+ s + l+ +sg +Wev++ +++ g+++++k+W eF k L gDf+vF+++g+sef +v RcHm_v2.0_Chr2g0103501 28 DDTSRDVKLGIPKKFVNEYGQC--LSNSVCLKLPSGSEWEVEV--TRSNGKVWFEKCWPEFSKFYSLSIGDFLVFEYEGDSEF--HV 108 4566667899*********855..7889***************..**********************************9999..88 PP EEE- CS B3 95 kvfr 98 +f+ RcHm_v2.0_Chr2g0103501 109 FIFD 112 7776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MSSFSRENDC RRPICCSPTP RFIQVILDDT SRDVKLGIPK KFVNEYGQCL SNSVCLKLPS 60 GSEWEVEVTR SNGKVWFEKC WPEFSKFYSL SIGDFLVFEY EGDSEFHVFI FDISTTEIDY 120 PIKRPKMEEA PEDEFSVEIL EDIPPSPKTR EKTPLPCRQS YKKMKTSLTG KTDQMFENEN 180 TEPFENPKKN KDSHCSASKI KSMEHKFKKY FL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 6e-26 | B3 family protein |