PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0103471 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 119aa MW: 13423.3 Da PI: 10.2584 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.6 | 4.7e-18 | 30 | 118 | 6 | 99 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 +++ + g+l lp fa++h e++ ++l+d++g+ W+v++ ++++ +++GW +Fv+ n+ +egD + F+l+++s+f + RcHm_v2.0_Chr2g0103471 30 MHPTYVCGGILNLPCGFAKKHLT--ERPNHVSLQDSNGKIWSVNIHFSNQA---SFRSGWTDFVRGNNFEEGDACAFELIKKSKFLF 111 4566666788***********63..46778***************665554...69************************99***99 PP EEEEE-S CS B3 93 vvkvfrk 99 v++fr+ RcHm_v2.0_Chr2g0103471 112 DVHFFRT 118 9999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MSPIGNKKKD NALQRANAFK SVKPSFVVAM HPTYVCGGIL NLPCGFAKKH LTERPNHVSL 60 QDSNGKIWSV NIHFSNQASF RSGWTDFVRG NNFEEGDACA FELIKKSKFL FDVHFFRTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-19 | B3 family protein |