PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0103431 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 142aa MW: 16262.7 Da PI: 10.6593 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57 | 3.4e-18 | 51 | 136 | 5 | 94 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 ++s++ + + l+lp kfa+++ k +++ +l+ s r+W+v+l r + r+++++GW eFv++n+Lkeg ++F+l+++ + RcHm_v2.0_Chr2g0103431 51 SLHSSYITGHYLYLPAKFANRYLVK--QPRHAILRVASKRTWSVNL--RYTAARTTFQTGWFEFVQDNDLKEGGACIFMLTDNIQVV 133 45789999999***********544..55679**************..77888899***********************98874443 PP .EE CS B3 92 lvv 94 + v RcHm_v2.0_Chr2g0103431 134 FDV 136 455 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MRPSSRTQKF TEGGPEVPRK MPGPVMASYG KYIALQRANG FKSANPDFRI SLHSSYITGH 60 YLYLPAKFAN RYLVKQPRHA ILRVASKRTW SVNLRYTAAR TTFQTGWFEF VQDNDLKEGG 120 ACIFMLTDNI QVVFDVVFFR AT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-18 | B3 family protein |