PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0102991

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 815aa MW: 87787.9 Da PI: 7.1605

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0102991	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	571	608	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + RcHm_v2.0_Chr2g0102991 571 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 608 664459******************************88 PP
2	BELL	120.3	8.8e-39	431	502	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eVd+rY++y+eq+q+v+++F+ v+g g+a pYt+lA+ka+SrhFrcLkda++ q+ RcHm_v2.0_Chr2g0102991 431 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNAFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAVTAQL 502 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 815 aa Download sequence
MGIATVQPLS PIFFSSYSSK GTHNNSIPEK YSNSSNSMSQ DYHQSIYSFP NGFERSAMTT 60 HQEQQQQQQQ QHHLAQQIRR EKLRVQGFEP PPPPLVGLDE EESGGLNPVY ETAGMLSEMF 120 NYPAGVAPPA ELLEHPMAAG YRMARPQQHQ SAAAEWYGSR QNMVGGLGPL GDSNKNQSGR 180 DNLAAHQHQI STINADSAAA MQLFLMNPQP RSPSPPAHST SSTLHMLLPN PSSTTFPGAG 240 GGGGGGGGAF GQFSWVSPDT HGHEGGSTTG PAHQLNTSNI NPSDHHQQGL SLSLSTSLQH 300 LEAAKAEELR MGDGSGLLYY NNPEGSSSSA HYSQYKNLVG HQSQQVHVGF GSSSFGVVNV 360 LRNSKYVKAA QELLEEFCSV GRGQLKKNKL GRQNSSLNPS SNPAGTSGGG AGGGASSSSS 420 KDAPPTLSAA DRIEHQRRKV KLLSMLDEVD RRYNHYCEQM QMVVNAFDLV MGFGAAVPYT 480 ALAQKAMSRH FRCLKDAVTA QLKHSCELLG EKDGAGNSGI TKGETPRLKM LEQSLRQQRA 540 FHQMGMMEQE AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN 600 WFINARVRLW KPMVEEMYQQ EANEEGGGAA AAAAVSVDQD QRSEQRNNQN NNTSDHHAQT 660 PTPPTTTTAM SATTTTTAAT RSDINASESD PSLLAFNRQR SFSENQSTTP TYPINMSTST 720 TATALVAPPV PYATTADDTC RRGSMDYGTT SGNASSSAVA GDHQSLHHHA GSTLITFGTT 780 TAGDVSLTLG LRHAGGANIP EKNTSSFSIR DFGGC

Sequence ? help Back to Top

Protein Sequence Length: 815 aa Download sequence

MGIATVQPLS PIFFSSYSSK GTHNNSIPEK YSNSSNSMSQ DYHQSIYSFP NGFERSAMTT  60
HQEQQQQQQQ QHHLAQQIRR EKLRVQGFEP PPPPLVGLDE EESGGLNPVY ETAGMLSEMF  120
NYPAGVAPPA ELLEHPMAAG YRMARPQQHQ SAAAEWYGSR QNMVGGLGPL GDSNKNQSGR  180
DNLAAHQHQI STINADSAAA MQLFLMNPQP RSPSPPAHST SSTLHMLLPN PSSTTFPGAG  240
GGGGGGGGAF GQFSWVSPDT HGHEGGSTTG PAHQLNTSNI NPSDHHQQGL SLSLSTSLQH  300
LEAAKAEELR MGDGSGLLYY NNPEGSSSSA HYSQYKNLVG HQSQQVHVGF GSSSFGVVNV  360
LRNSKYVKAA QELLEEFCSV GRGQLKKNKL GRQNSSLNPS SNPAGTSGGG AGGGASSSSS  420
KDAPPTLSAA DRIEHQRRKV KLLSMLDEVD RRYNHYCEQM QMVVNAFDLV MGFGAAVPYT  480
ALAQKAMSRH FRCLKDAVTA QLKHSCELLG EKDGAGNSGI TKGETPRLKM LEQSLRQQRA  540
FHQMGMMEQE AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN  600
WFINARVRLW KPMVEEMYQQ EANEEGGGAA AAAAVSVDQD QRSEQRNNQN NNTSDHHAQT  660
PTPPTTTTAM SATTTTTAAT RSDINASESD PSLLAFNRQR SFSENQSTTP TYPINMSTST  720
TATALVAPPV PYATTADDTC RRGSMDYGTT SGNASSSAVA GDHQSLHHHA GSTLITFGTT  780
TAGDVSLTLG LRHAGGANIP EKNTSSFSIR DFGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-151	TALE family protein