PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr2g0098731 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 24907.4 Da PI: 9.5117 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.2 | 4.7e-10 | 193 | 217 | 4 | 28 |
XCHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaei 28 ++r +r++kNRe+A rsR+RK++++ RcHm_v2.0_Chr2g0098731 193 DRRHKRMIKNRESAARSRARKQEYC 217 6899********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MLSSTGSEES NYNSSSWSSP TTTPASPFSQ ATPRRTMEEV WKDINLASLS DSNNSLNNNP 60 NFRNMTLQDF LARPFGNVVS PRPEHHHHHH TTRNSPPPPQ AVMPSPATVL SLNHLSSDQF 120 QLFCLENLNT SPIVNINHPN SSTVSDNSFS GAYPFEGLGN QSSPSSGLVM PSGFGVGKKR 180 LPESDRSNFG GGDRRHKRMI KNRESAARSR ARKQEYCCPY NSQKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-12 | bZIP family protein |