PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0351961 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 182aa MW: 20659.2 Da PI: 6.8941 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.5 | 8.9e-12 | 49 | 144 | 2 | 85 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangL 74 +k+lt sd ++++rl +pk+ +++h ++++ +k++t++d++ + ++++ ++s++yv+ ++W e vk +L RcHm_v2.0_Chr1g0351961 49 KKKLTLSDLGNLSRLLVPKEMVKNHvlphvngdfvqRLESKAGKQVTVKDSDKeteHQLTFRY--LRSSKSYVFNGNWMEIVKGRDL 133 589999************************999999555557788999997666456666666..********************** PP -TT-EEEEEE- CS B3 75 kegDfvvFkld 85 k D + ++ d RcHm_v2.0_Chr1g0351961 134 KKDDEIGLYWD 144 ***98888854 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MEPKTKSDPV VECDDAQNLH TLTEGSARPS AHNHIDEQVA RDPALYKIKK KLTLSDLGNL 60 SRLLVPKEMV KNHVLPHVNG DFVQRLESKA GKQVTVKDSD KETEHQLTFR YLRSSKSYVF 120 NGNWMEIVKG RDLKKDDEIG LYWDTLNSNF HFSLLKLASQ ESQAADEVTR AWSSTMTSSL 180 ES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 1e-13 | B3 family protein |