PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0342511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 122aa MW: 13851.8 Da PI: 6.093 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.1 | 2.4e-11 | 62 | 110 | 37 | 86 |
EEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 37 tledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 ++ + +sWe+++ + +++ + + W+ Fv++n Lk+gD ++F+l+g RcHm_v2.0_Chr1g0342511 62 MVLNFGDKSWEMTY--NETKRLkLMDRHSWRAFVDDNSLKAGDGCIFELTG 110 5677888*******..665554488889********************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MEDSAQSRAT PTIELHGDEF WPLSGKPFFD IIFTKSHVKP LYQMEIPAKL DPVLPAGASV 60 PMVLNFGDKS WEMTYNETKR LKLMDRHSWR AFVDDNSLKA GDGCIFELTG CDTPNPQRRH 120 PS |