PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0342401 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 145aa MW: 16384.9 Da PI: 4.9866 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.8 | 2.9e-11 | 62 | 120 | 37 | 96 |
EEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 37 tledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++ + +sWe+ + + +++ v ++ W+ Fv++n Lk+gD ++F+l+g ++++ v+kv RcHm_v2.0_Chr1g0342401 62 MVLSFGDKSWEMIY--NETKRLkLVDRQSWRAFVDDNSLKAGDGCIFELTGCDSTKVVFKV 120 4566677*******..55554448889*********************9976666555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MEDSAQSRAT PTIELHGDEF WPLSGKPFFD IIFTKSHVKP LYQMEIPAKL NPVLPAGASF 60 PMVLSFGDKS WEMIYNETKR LKLVDRQSWR AFVDDNSLKA GDGCIFELTG CDSTKVVFKV 120 QILRGDIPAE LVEKYSSETE KPIII |