PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929784.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 494aa    MW: 54941.4 Da    PI: 4.1288
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.8e-08268316247
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE++ + d+v   +       W+   + ++  Rt ++++s+++++
   XP_023929784.1 268 KKWTEEEEQAFQDVVLSNPASlgknFWDHLLAVFP-SRTKNDIVSYYFNV 316
                      58*************6654445555**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MIHKRPLVGE DSYVVASKKP RQLEHSSQCA CTINIVPSNN APEKPQTSGK DSFIKCQDEG  60
RLVNDAITEI SNETTVLETG ASSSISQFLW VNGSIIGADV MSEAAAHLSL FPEIFEAEHQ  120
LKSLYQSDEI YSSLFDCPTR KLVSVGPEHQ AFVPEWGLQG LKNSSDHLDN SDPLLGLVHK  180
SGGGLLIDDA SEEILMGTRV IPMPDLEASA NSCYRNRGTR SDCRCLDEGS VRCVRQHVME  240
AREKIRENLG QEIFEELGFC EMGEEVAKKW TEEEEQAFQD VVLSNPASLG KNFWDHLLAV  300
FPSRTKNDIV SYYFNVFMLR KRAEQNRLDP LNIDSDNDEW QKSELGLADE DEDSVVESPL  360
DQDATANHQE DHVEDCLDDI EVEEEIDACN NGANIIIHRV GTDEDDGGDI DDISGTHVST  420
FYGDCHVDID LELCGKIHGS NGEDYDIQDD SCTSYECQRD RVDSCGTLDG ETNAREPGGE  480
MKHSMIHLVE CQDV