PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929593.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 278aa MW: 31356.2 Da PI: 8.6463 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 108.7 | 6.7e-34 | 48 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 lp+G++F+Ptd+e++ e+L+ kv+++ ++l+ +++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + XP_023929593.1 48 LPAGVKFDPTDQEIL-EHLEGKVQSDACKLHPlidefipTLEGEnGICYTHPEKLP-GVSKDGLVRHFFHRPSKAYTTGTRKRRKVNtdieggET 140 799***********9.99*********5553333333222333336**********.555666688******************74445655577 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk++++++ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023929593.1 141 RWHKTGKTRPIFV-GGKVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 188 8************.9*************6657999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MTQCSERGDN QTILDAKSKD NPIRTCPSCG HQIKCEDKQA GIHDLPGLPA GVKFDPTDQE 60 ILEHLEGKVQ SDACKLHPLI DEFIPTLEGE NGICYTHPEK LPGVSKDGLV RHFFHRPSKA 120 YTTGTRKRRK VNTDIEGGET RWHKTGKTRP IFVGGKVKGY KKILVLYTNY GKQRKPEKTN 180 WVMHQYHLGN NEEEKDGELV VSKVFYQTQP RQCGSFIKES LSSKSNGQNG HEDGNLRTNA 240 FFEYYNPSLI AFEQGNQNRA STPQLLSHFA VHNGSFIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-125 | NAC family protein |