PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929587.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 136aa MW: 15610.9 Da PI: 10.6923 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.8 | 2.9e-09 | 2 | 33 | 17 | 48 |
HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 17 kqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++G g+W++ +++ g+ R++k+c++rw +yl XP_023929587.1 2 EEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 33 89****************************97 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 39 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_023929587.1 39 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 84 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
IEEHGHGSWR ALPAKAGLQR CGKSCRLRWT NYLRPDIKRG KFSLQEEQTI IQLHALLGNR 60 WSAIATHLPK RTDNEIKNYW NTHLKKRLAK MGIDPLTHKP KNDTLLSNDG QTKNAANLSH 120 MAQWESARLE AEARLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 6e-88 | MYB family protein |