PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023929442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 422aa MW: 48636.1 Da PI: 7.4529 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.5 | 3.5e-19 | 179 | 225 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++vkq+G + W+ Ia++++ gR +kqc++rw+++l XP_023929442.1 179 KGQWTVEEDRLLIQLVKQYGVKKWSYIAQMLP-GRIGKQCRERWHNHL 225 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 56.4 | 6.9e-18 | 231 | 273 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd+ l++a+++ G++ W+ Ia++++ gRt++++k++w+ XP_023929442.1 231 KDTWSEEEDKVLIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 273 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 422 aa Download sequence |
MELDTMFREN PASQPILLSD NYLKSYMKDD FSFEAPSSKG FLQDFHYLDQ FQTNGSLSNP 60 IFGVQTQCYG CTSSDFDIYE CKPFMDNGGH GHVMENFQGG GYLNHPQRNP IDIMGSDRSH 120 MVVTTCQDII KPLNFVVPDE VSCITAENGY YKKIGMNKNR ALPTTKKPQK GRKKSNVVKG 180 QWTVEEDRLL IQLVKQYGVK KWSYIAQMLP GRIGKQCRER WHNHLRPDIK KDTWSEEEDK 240 VLIQAHAEIG NKWAEIAKRL PGRTENSIKN HWNATKRRQY SKRKCRSKYP RGSLLQEYIK 300 GLNLDPSNMM QNRRKTSSSN ATANNTTIKT PTQLPQSTDQ FCPNARLVPN YDFNEVPDFY 360 FDENMFQESC SIDSLLDDMH CAPVVVDKND FDMDIPVDMT PVVDCDVKKE LDLVEMMSQL 420 QK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-102 | MYB family protein |