PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 231aa MW: 26621.3 Da PI: 4.3378 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65 | 1e-20 | 32 | 85 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k XP_023929345.1 32 KKRRLSPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 85 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 135.2 | 2.2e-43 | 31 | 122 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ ++L ke+e+L++e+ XP_023929345.1 31 EKKRRLSPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDDLKSSYDSLYSNYDTLVKEHEKLKSEVV 122 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MSMEESSKRR SFFSSPDELF DEEYYDEQLP EKKRRLSPEQ VHLLEKSFET ENKLEPERKT 60 QLAKKLGLQP RQVAVWFQNR RARWKTKQLE RDYDDLKSSY DSLYSNYDTL VKEHEKLKSE 120 VVSLNEKLQA KGVAGADISA QKAEPLPGDI TNVSALQFSV KVEDRLSCGS AVVDEDGPQI 180 LDTGDSYFPS DNYPAEDDGS DDGHSYFCNV FVAAEPQHQE DEEPLEWLEW P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 88 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 5e-63 | HD-ZIP family protein |