PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 208aa MW: 23436.6 Da PI: 9.5431 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 124.2 | 5.7e-39 | 84 | 160 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+++C +dl+ ak+yh+rhkvCe h+ka+vvlv+g++qrfCqqCs+fhe+s+fD++k+sCr++La+hnerrrk+ XP_023929334.1 84 RCQADECGVDLKMAKTYHKRHKVCERHAKAAVVLVTGIRQRFCQQCSKFHEISQFDDNKKSCREKLAGHNERRRKTY 160 6**************************************************************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MAKRPFKKQE QEQECSDPYE DGEEEVEYTR KKVMIRVVSA GQRMSSLVPL MSYSSDSSSS 60 SSSTSTSTCY GNIIGGSDSI GSLRCQADEC GVDLKMAKTY HKRHKVCERH AKAAVVLVTG 120 IRQRFCQQCS KFHEISQFDD NKKSCREKLA GHNERRRKTY ADLQAENKQK PPTSIMGGGL 180 LKAMRYSNYG EKSLPGSPNM KHCRINFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 1e-33 | SBP family protein |