PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | bHLH | ||||||||
Protein Properties | Length: 324aa MW: 35654.8 Da PI: 5.7426 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.00039 | 191 | 229 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq XP_023929330.1 191 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 229 6678889999999999998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MMAGNPNWWS MPPPSLLPPQ YALGSSSLPF NPLAAENQEL PQSWSQLLLG GLSASDEESF 60 RLSHFQPKKL ENWDDQILNQ SQRVLPVNVD VIKQEISQNS NLYGLEDHEE FQALPRQAAW 120 SQQIMPVSSP RSCVTSLSNN NILDFSYKKM DGSNQNLDHS SESTSSATGG AYKKARVQPS 180 STSSQPPLKV RKEKLGDRIT SLHQLVSPFG KTDTASVLLE AIGYIRFLQG QIEALSSPYF 240 GNASKNMRSQ QSVQGERNGV FPEDPGQLLN DACLKRKEAP NQDTQDKPRD LKSRGLCLVP 300 VSCTQLVGND NGADFWAPAY GGGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 6e-69 | bHLH family protein |