PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929265.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 325aa    MW: 35782.9 Da    PI: 5.7426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.00041922301255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_023929265.1 192 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 230
                     6677888999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MMAGNPNWWS MPPPSLLPPQ YALGSSSLPF NPLAAENQEL PQSWSQLLLG GLSASDEESF  60
RLSHFQPKKL ENWDDQILNQ SQRVLPVNVD VIKQEISQNS NLYGLEDHEE FQALPRQAAW  120
SQQIMPVSSP RSCVTSLSNN NILDFSYKKM DGSNQNLDHS SESTSSATGG AYKKARVQPS  180
STSSQPPLKQ VRKEKLGDRI TSLHQLVSPF GKTDTASVLL EAIGYIRFLQ GQIEALSSPY  240
FGNASKNMRS QQSVQGERNG VFPEDPGQLL NDACLKRKEA PNQDTQDKPR DLKSRGLCLV  300
PVSCTQLVGN DNGADFWAPA YGGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.15e-67bHLH family protein