PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023929229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 423aa MW: 47063.7 Da PI: 7.2591 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.1 | 9.8e-34 | 46 | 100 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_023929229.1 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 65.8 | 8e-21 | 48 | 99 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_023929229.1 48 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 99 89******************99*****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 423 aa Download sequence |
MYHHHQHQGK NVHSSSRMSI PPERHLFLQG GNGPGDSGLV LSTDAKPRLK WTPDLHERFI 60 EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANS GVTKTESLHI 120 GIAGLGCDRV SEANGTTLDN LSIGPQTNKN LHMNEALQMQ LEVQRRLHEQ LEVQRHLQLR 180 IEAQGKYLQS VLEKAQETLG RQNIGTVGLE AAKMQLSELV SKVSNQCLNS AFSELKELQG 240 LCPPQQTQAN QPNDCSMDSC LTSCEGSQRD QEIHNRGMGP YSGGAPLEQK EICEDPMLQK 300 TELRWSDDLR DRMFHSSIGK DAERRMFPVE RNSSNLSMSI GLGGEKGNGS NSYSATRFKG 360 RDSDDCFPDR SNNRAESVKL ENEKISQGYR IPYFSAKLDL NAHDENDAAA SCKQFDLNGF 420 SWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G04030.3 | 1e-163 | G2-like family protein |