PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929228.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 423aa MW: 47063.7 Da PI: 7.2591

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.8e-34	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_023929228.1 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	65.8	8e-21	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_023929228.1 48 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MYHHHQHQGK NVHSSSRMSI PPERHLFLQG GNGPGDSGLV LSTDAKPRLK WTPDLHERFI 60 EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANS GVTKTESLHI 120 GIAGLGCDRV SEANGTTLDN LSIGPQTNKN LHMNEALQMQ LEVQRRLHEQ LEVQRHLQLR 180 IEAQGKYLQS VLEKAQETLG RQNIGTVGLE AAKMQLSELV SKVSNQCLNS AFSELKELQG 240 LCPPQQTQAN QPNDCSMDSC LTSCEGSQRD QEIHNRGMGP YSGGAPLEQK EICEDPMLQK 300 TELRWSDDLR DRMFHSSIGK DAERRMFPVE RNSSNLSMSI GLGGEKGNGS NSYSATRFKG 360 RDSDDCFPDR SNNRAESVKL ENEKISQGYR IPYFSAKLDL NAHDENDAAA SCKQFDLNGF 420 SWS

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MYHHHQHQGK NVHSSSRMSI PPERHLFLQG GNGPGDSGLV LSTDAKPRLK WTPDLHERFI  60
EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANS GVTKTESLHI  120
GIAGLGCDRV SEANGTTLDN LSIGPQTNKN LHMNEALQMQ LEVQRRLHEQ LEVQRHLQLR  180
IEAQGKYLQS VLEKAQETLG RQNIGTVGLE AAKMQLSELV SKVSNQCLNS AFSELKELQG  240
LCPPQQTQAN QPNDCSMDSC LTSCEGSQRD QEIHNRGMGP YSGGAPLEQK EICEDPMLQK  300
TELRWSDDLR DRMFHSSIGK DAERRMFPVE RNSSNLSMSI GLGGEKGNGS NSYSATRFKG  360
RDSDDCFPDR SNNRAESVKL ENEKISQGYR IPYFSAKLDL NAHDENDAAA SCKQFDLNGF  420
SWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-163	G2-like family protein