PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 594aa MW: 65749.1 Da PI: 9.8673 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.5 | 1.5e-08 | 227 | 275 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 r++W+++E l+++v++lG g+W++I ++ Rt+ ++++r++ XP_023929046.1 227 RNKWSEDETAYLLKGVARLGVGNWTKILECSEyhfDCRTALDLRDRFRV 275 79*********************************99*********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence |
MSSCLNQTER LSYSRMMPKG SRTAFNKVTI GWQGSSQAHK LIYREGNAII KITQPFKVLH 60 LFMDRNATLP TSLDYINRPN PIEPQSQPHK HPLYGPSRLS SGANEDLRRL LVPERAVPSA 120 DGRPSKRRKS GPGPNDAADV NTGSLDLPKL PVRSSTKRMR IPPTLSGLHQ PPPDARLLPS 180 ISVEQPPKAR VPPSVEEINA TSLQDTATKT TQAKPRCNSP MTGKTKRNKW SEDETAYLLK 240 GVARLGVGNW TKILECSEYH FDCRTALDLR DRFRVCRPQD YKDPRGASSR YVIDQDSDDV 300 ARGTKSERKS STELRALGIE QPFTKVRRRK RTKYTPSEDQ MLWEGFEKHG NMWAVILDHG 360 KDVFQSHRTA TDLRDRFRTR YPERYAQTGL APRPEVFPAP PQRQKDTKAA DLQTKTSIQT 420 SVTKPNKSTA NAPDLSFSAS VEESRPLLPK RAPPNSIFPY HDVFFGAPFD SAADDHEPEA 480 QSIVLDRGIL DWANEPARTN ALAAELGGRT GIDPLVTLRP PSHLPHLPGA ERHAANGSGG 540 AYTNGEVLPP LAAITADGAD GLQFEQLQLP SLLFDGGVDG RGAGHLMNIE DMLG |