PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929046.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 594aa    MW: 65749.1 Da    PI: 9.8673
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-08227275146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                      r++W+++E   l+++v++lG g+W++I ++       Rt+ ++++r++ 
   XP_023929046.1 227 RNKWSEDETAYLLKGVARLGVGNWTKILECSEyhfDCRTALDLRDRFRV 275
                      79*********************************99*********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MSSCLNQTER LSYSRMMPKG SRTAFNKVTI GWQGSSQAHK LIYREGNAII KITQPFKVLH  60
LFMDRNATLP TSLDYINRPN PIEPQSQPHK HPLYGPSRLS SGANEDLRRL LVPERAVPSA  120
DGRPSKRRKS GPGPNDAADV NTGSLDLPKL PVRSSTKRMR IPPTLSGLHQ PPPDARLLPS  180
ISVEQPPKAR VPPSVEEINA TSLQDTATKT TQAKPRCNSP MTGKTKRNKW SEDETAYLLK  240
GVARLGVGNW TKILECSEYH FDCRTALDLR DRFRVCRPQD YKDPRGASSR YVIDQDSDDV  300
ARGTKSERKS STELRALGIE QPFTKVRRRK RTKYTPSEDQ MLWEGFEKHG NMWAVILDHG  360
KDVFQSHRTA TDLRDRFRTR YPERYAQTGL APRPEVFPAP PQRQKDTKAA DLQTKTSIQT  420
SVTKPNKSTA NAPDLSFSAS VEESRPLLPK RAPPNSIFPY HDVFFGAPFD SAADDHEPEA  480
QSIVLDRGIL DWANEPARTN ALAAELGGRT GIDPLVTLRP PSHLPHLPGA ERHAANGSGG  540
AYTNGEVLPP LAAITADGAD GLQFEQLQLP SLLFDGGVDG RGAGHLMNIE DMLG