PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023928869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 396aa MW: 44465.2 Da PI: 7.2618 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.2 | 2.8e-52 | 15 | 141 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv +yLk+kv+++ l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++v+s+ XP_023928869.1 15 LPGFRFHPTDEELVGFYLKRKVQQRALPI-ELIKQVDIYKYDPWDLPKLAASGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPVYSSd 108 69***************************.89***************8888899***************************************95 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_023928869.1 109 STKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141 5666***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 396 aa Download sequence |
MDEKNDVDKV DDVILPGFRF HPTDEELVGF YLKRKVQQRA LPIELIKQVD IYKYDPWDLP 60 KLAASGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPVYSSDST KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPSLTESAPP KKLLDKNIFA NDSWAICRIF KKTNSMAQRA 180 FSHCWVSPLP ETLVSDMFTQ GTNRTQFSSE NISCTTEIGS AIQFCSTNDL QQAHTSSFSA 240 FDIPSCKPIN PTVYKPSLFP ASNGDLQSGF MFSPLEVSGP MKCAVDTTSM LLNPALIGDV 300 SNASRTTDFE GPPQQFSGFS ISLPQEMQEN LGTGEDVSGL RKNQGAALNN QWETIQSIGF 360 PFNLPSNDAW RSNLPWDSPP CPSEMSTNYS TNKCYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-99 | NAC family protein |