PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023928669.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family AP2
Protein Properties Length: 425aa    MW: 46709.2 Da    PI: 8.4913
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023928669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-1770129155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  XP_023928669.1  70 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 129
                     57*******************766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MASSSSDPGL KSEAGGGGGG GGSSGEAAMV AKDELFVYRG GLKKAKKERG CTAKERISKM  60
PPCAAGKRSS IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DEEEAAARAY  120
DLAALKYWGP GTLINFPVTD YTRDLEEMQN VSREEYLASL RRKSSGFSRG ISKYRGLSSR  180
WEPFGRMGAS EYFNSTHYGT GDDPAAESEY LGNFCSERKI DLTSYIKWWG PNKTRQSDAA  240
LKSSEETKHA GDIGVELKTL ELAVQPTEPY QMPCLGMSNE MRKHKGSTVS ALSILSRSAA  300
YKSMEEKASK KPENSIDNDE NEDKNTINKV DYGKAVEKST SLDVASERLG VALGMSGGMS  360
LQRNAYPLTP FLSAPLLTNY NTVDPLADPI LWTSLVPVLP SGLSRTAEVT KTETSSTYTF  420
FHADE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-164AP2 family protein