PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928367.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 294aa MW: 32149.2 Da PI: 4.5686

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.2e-05	267	290	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C++sF++ L++H + H XP_023928367.1 267 FPCNSCNRSFNSEIGLQSHTKAkH 290 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MEFWGAEVKS GEPLEVYPGD GFILHLSQAC LGEVKKNIGN ESVCLFVKVD KQKLVLGTLS 60 SENFPQLSFD LVFEKKFELS HNWKNGSVYF TGYKACPPEQ GEVSDSEEDF PVVAHDSGKY 120 EPQAKPAAKP DVTAAKRVKI VEPNKDEDMD EDDVDKDASS NDDSSDEDDV NEAKAKVNTK 180 EEFSEDDDSS DDEDSSEDED EETPMKAKAG KKRPFESAQK TPVPEKKAKL VTPENTDGKK 240 GGGHVATPHP SKKAATKQQT PKSGGAFPCN SCNRSFNSEI GLQSHTKAKH SDGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44750.2	2e-35	C2H2 family protein