PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928234.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 656aa MW: 69781.7 Da PI: 6.2143

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.3e-09	212	257	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 r++W++ Ed+ l+ av++ G g+W+ I + Rt+ q+ rw+ XP_023928234.1 212 RKPWSEAEDKELIAAVQKCGEGNWANILKGDFkGDRTASQLSQRWN 257 789************************9842235999999999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MVEKTNNTNA NKKHKTSSLT QDDISNLLQR YNATTVLTLL QEVAHCAESK IDWDALVKNT 60 STGISDAREY HMLWRHLAYH HALLDSFQFA PHPLDDDSDL ECEVETFPSV SGEATTEAAA 120 CVKVLIASGL PSDSSLPNSS IVEAPITINI PNGLSSRAPL ENSEATCSMQ GTNISVPVFV 180 QKMSLPAATP TSAEVLDGNG PASGNFPPRR KRKPWSEAED KELIAAVQKC GEGNWANILK 240 GDFKGDRTAS QLSQRWNIIR KRKGNLNLES NSAGSQLSEA RRAAHHAMSL ALDMPVKNST 300 STRPAVTNTA SKSVLPTTTA EAAKVGSSSI QAQGCSQQGP IPTKPPPIGS LGPTAKSQVS 360 SKKSSMQPTI GSDSVLRATA VAAGARIVSP SAAASFFKAT QTKNIVHFKP TGGSSTKSSM 420 PAGVSTHSET QTNVHYVSTG PKATQCSSST AVAVAPTISH PSSVKAASPI VQHTASAFPT 480 SLITSSEPTN SISSGLPSEL LVKQEIKRAE EIEVSESHSA PKEQLEGDGV CVSANARIEQ 540 IQEDKAASAD MEVEFEKQMT EIKSNSSSLD MMTAESNHKA VIERQAEARQ NANDNEMRGS 600 PVRNDNQSAP RVKSENEGTN EKQADLPSLV ADGCNEKLEV LIKEESGNEI EEEKVK

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MVEKTNNTNA NKKHKTSSLT QDDISNLLQR YNATTVLTLL QEVAHCAESK IDWDALVKNT  60
STGISDAREY HMLWRHLAYH HALLDSFQFA PHPLDDDSDL ECEVETFPSV SGEATTEAAA  120
CVKVLIASGL PSDSSLPNSS IVEAPITINI PNGLSSRAPL ENSEATCSMQ GTNISVPVFV  180
QKMSLPAATP TSAEVLDGNG PASGNFPPRR KRKPWSEAED KELIAAVQKC GEGNWANILK  240
GDFKGDRTAS QLSQRWNIIR KRKGNLNLES NSAGSQLSEA RRAAHHAMSL ALDMPVKNST  300
STRPAVTNTA SKSVLPTTTA EAAKVGSSSI QAQGCSQQGP IPTKPPPIGS LGPTAKSQVS  360
SKKSSMQPTI GSDSVLRATA VAAGARIVSP SAAASFFKAT QTKNIVHFKP TGGSSTKSSM  420
PAGVSTHSET QTNVHYVSTG PKATQCSSST AVAVAPTISH PSSVKAASPI VQHTASAFPT  480
SLITSSEPTN SISSGLPSEL LVKQEIKRAE EIEVSESHSA PKEQLEGDGV CVSANARIEQ  540
IQEDKAASAD MEVEFEKQMT EIKSNSSSLD MMTAESNHKA VIERQAEARQ NANDNEMRGS  600
PVRNDNQSAP RVKSENEGTN EKQADLPSLV ADGCNEKLEV LIKEESGNEI EEEKVK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	214	PRRKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-89	MYB_related family protein