PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927850.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 375aa    MW: 41751.1 Da    PI: 4.5555
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-19110159255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  XP_023927850.1 110 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDTEARRIRG 159
                     69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MCGGAIISDF IAPVGPRRLT ADYLWGDRKK PTSGRRFSKP VVDIVDDFEQ DFQGFKDDDE  60
SDIDEEEEVL VQDVKPFAFS APRSSGSKPV KSVEFNGQAE KSAKRKRKNQ YRGIRQRPWG  120
KWAAEIRDPR KGVRVWLGTF NTAEEAARAY DTEARRIRGK KAKVNFPDET PRASPKRSVK  180
ANLQKPLAKA NLNSVQPNLN QNFNFVNNSE QDFTMGLMEE KPFTNQYGCM VNADVGLKPF  240
VSSNTSPVYF SSDQGSNSFD CSDYGFGEQG PKTPEISSVF SATVEGDNTQ LLEDANPPKK  300
LKSDSGNAVF VEDNTAKTLS EELSAFENSD FQMPYLDGSW DESIEALFSG DTTQDGNSMD  360
LWSFDDLSVM VGGDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.33e-86ERF family protein