PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023927834.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 304aa MW: 34680.1 Da PI: 9.2463

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023927834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.3	1.8e-20	126	186	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t+eql++Le+ Fe+ n +p+ ++++e++++l ++++++V++WFqNrRa+ ++ XP_023927834.1 126 RQRWSPTTEQLQILERIFEEdNGTPNNQRIKEITTELaqhgKISDSNVYNWFQNRRARLRR 186 79***************99***********************************997 PP
2	Wus_type_Homeobox	93.5	1.8e-30	126	188	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RW+Pt+eQ++iLe+++++ tPn+++i++it+eL+++Gki+d NV++WFQNr+aR r+kq XP_023927834.1 126 RQRWSPTTEQLQILERIFEEDNGTPNNQRIKEITTELAQHGKISDSNVYNWFQNRRARLRRKQ 188 79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MVLAKYASKF KPSSLFLNYC LCSKNFSVRK GCFVSKISQL NSTQSSKAKQ GEECGKKMHV 60 NKNRVMMTEE QMEVLRQQIA AYAIISDQLV QMHKAFSAQH THSGMRQGSL YYDPWIASSG 120 QKMNIRQRWS PTTEQLQILE RIFEEDNGTP NNQRIKEITT ELAQHGKISD SNVYNWFQNR 180 RARLRRKQSV PEPQKPESET GKEVQSLKEK KMIPERTLSY ENSAQRSKTI HLQQSPEIST 240 EMLRLNSHSN EGEPTFPSDS DLSFSGSLGH MSFVPTPGTN RLGEMEVPGN YNPYCYGEGY 300 DMAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	3e-52	WOX family protein