PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023927382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NF-YA | ||||||||
Protein Properties | Length: 342aa MW: 37385.9 Da PI: 9.7543 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101 | 1.2e-31 | 171 | 227 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e +kk +k rkpylheSRh hA+rR+Rg+gGrF XP_023927382.1 171 EEPVFVNAKQYHGILRRRQSRAKAELQKKA-IKVRKPYLHESRHLHAMRRARGCGGRF 227 69***************************9.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MMPAKLGNED RRLENCGPTA LHSTVYSHPL WSGVGSNGPL GESGSKSSSM EHLNGSVKNG 60 VIQLKANGQL DGGANFNKET QVTVASQSDG NIGQEHQHVN HVPSSTPKMG EHLDPNSNME 120 LVGHSIVLTP YMYSDPHYGG MLAPYGHQAM IPAQLYGMHQ ARMPLPLEME EEPVFVNAKQ 180 YHGILRRRQS RAKAELQKKA IKVRKPYLHE SRHLHAMRRA RGCGGRFLNT KKLDNDANPT 240 SEKGMNMGAN SSVQPTSKSG SEYLPNNGNG KLDSSHNKQE GSRSMIHNMH KAHNLSNGNS 300 NGHGLSSTYH SLFSDDKEGG YMGQQRESMH MNGIARGALP IK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 2e-42 | NF-YA family protein |