PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927157.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 183aa    MW: 21016.3 Da    PI: 8.0961
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.4e-15355155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++  +v+YI +Lq
  XP_023927157.1  3 KKLNHNASERDRRKKVNDLYSSLRSLLPGtD---RTKKLSIPKTVSSVVKYIPELQ 55
                    6789*************************66...9999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MHKKLNHNAS ERDRRKKVND LYSSLRSLLP GTDRTKKLSI PKTVSSVVKY IPELQKEVKG  60
LIHKKEELLS RISRLEDETL EEENPKIIAQ STSISIWASR IDNRQIVVQI SIDGKVHKTP  120
LSEILCNLEE DGLILLNASS FESFGGRIFC NLHLQVERTH GLECEILSEK LMSLYDKREE  180
LLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-55bHLH family protein