PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023927031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 227aa MW: 24969.8 Da PI: 9.4669 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.4 | 2.1e-10 | 135 | 175 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+ E+++l +a + G+ W+ Ia+t++ +Rt+ ++k +w+k XP_023927031.1 135 PWTPAEEQRL-KALRDAGSS-WSEIAKTFP-TRTEGSVKKHWYK 175 8********9.578999999.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MASDIASVGM QNPYHQAYAY APSPHDQSAF AFPGQPHQYR PQLQTQQLPL PSHHHQHQHP 60 SLAQQSPNAR KRRVSDLNES MPGSLPGSAS SNASAYGLPQ TLVPGPSELD VGLGPSQGPS 120 QIPSPVAKKG RTNTPWTPAE EQRLKALRDA GSSWSEIAKT FPTRTEGSVK KHWYKDMHYA 180 EFAEDESAAL LQAIKDYENN KWKVIGQKVG KPAKACEQFA KEQGWKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09370.1 | 1e-09 | MYB family protein |