PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023927010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24935.4 Da PI: 4.3995 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.9e-17 | 73 | 122 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 + y+GVr++ +g+WvAeIr+p + r k+ +lg+f+ a++Aa a++ a+++++ XP_023927010.1 73 CNYRGVRQRT-WGKWVAEIREP---N-RgKKLWLGTFDAADDAASAYDDAARAMY 122 56*****999.**********8...3.35**********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGYLDQGVPM ESSKKRKTRG DELSVAETLA EWRDYNAQVD SSGDDAKRAR KLSSKGPKKG 60 CMKGKGGAEN LQCNYRGVRQ RTWGKWVAEI REPNRGKKLW LGTFDAADDA ASAYDDAARA 120 MYAASARRNS PESVSTMSGP TPAGFEASAD GSTSSLVKDE STDSGLEELL AFSENELFDA 180 AELMALLEDN HDFTDSVLDF GFDVNQLGFP DTEADLPSLV DTEGRHEPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 3e-24 | ERF family protein |