PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023927004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25849.6 Da PI: 4.6888 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.1 | 2.9e-15 | 79 | 127 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 y+ Vr++ +g+WvA Ir+p + r k+ +lg+f+ta++A a+++a+++++ XP_023927004.1 79 NYRRVRQRT-WGKWVAKIREP---N-RgKKLWLGTFDTADDATSAYDEAARAMY 127 6999**999.**********8...3.35**********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MEKSHMGYLD QGVPMESSKK RKTRGDELSV AETLAKWRDY NAQVDSSGDD AKRARKLSSK 60 GPKKGYMKGK GGAENLQCNY RRVRQRTWGK WVAKIREPNR GKKLWLGTFD TADDATSAYD 120 EAARAMYAAS ARLNFPESVS TMSGPTPAGF EASADGSTSS LVKDESTDNG LEELLAFSEN 180 ELFDAAELMA LLEDNHDFTD LVLDFGFDVN QLGFPDTEAD LPSLVDTEGR HEPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G05410.2 | 2e-26 | ERF family protein |