PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926951.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Dof
Protein Properties Length: 321aa    MW: 34259 Da    PI: 9.2528
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.8e-3955115262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  XP_023926951.1  55 PEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 115
                     67899*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVFSSIPVYL DPPNWHQQPN HIHQPAGGGG GGGGSSSIRP GSMTDRARLA KIPQPEAALK  60
CPRCESTNTK FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NKRSKSNRSK  120
SPITTGHQAG SSSTSTVSSN CNNDVLNHMP HPPPPQLPFL PSLHHLSDYG SGDIGLNFGG  180
FQHPVAATGG GSGGRDVEYQ IGNSSSGGGG AGLSTGLSEQ WRMQQVQQFP FLTNLEPPIG  240
LFQFDGENVQ PPSYVGIAGQ LRSKPMDSGV SQTASVKMEE SHGLNLSRNP LGTSGNDQYW  300
GGSNAWTDLS GFTSSSTSHM L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.24e-47Dof family protein